Plastic Biodegradation Potential of Soil Mangrove Mold Isolated from Wonorejo, Indonesia

Nengah Dwianita Kuswytasari, Alfia Rahma Kurniawati, Aunurohim Aunurohim, Nur Hidayatul Alami, Enny Zulaika, Maya Shovitri, Nimerta Kumari, Arif Luqman

Abstract


Background: Plastic has become one of the most significant environmental threats, especially in mangrove areas due to their non-biodegradable nature. This indicates that there is a need to find alternative degradation methods for these materials, such as the use of mold. Therefore, this study aims to isolate potential plastic degradation mold from the Wonorejo mangrove sediments.

Methods: The isolates were identified based on their morphological characteristic and ITS rDNA sequence. Plastic degradation ability of the samples was evaluated using parameters of plastic dry weight loss, FTIR pattern, SEM, and AFM image.

Results: A total of eight sediment mold were identified, including Perenniporia spp., Trametes polyzonaAspergillus terreusPorostereum spadiceumLeptosphaerulina chartarumAspergillus fumigatus, and Hypocreales sp. Among these molds, the best activity was exhibited by Aspergillus terreus, which degraded 12.5% LDPE and 4.9% white plastic after 30 days, followed by Perenniporia sp. with 10.6% LDPE and 3.4% white plastic degradation. Furthermore, the SEM and AFM images showed that the surface of plastic was damaged after incubation. There were also several attenuations of particular peaks, which indicated the occurrence of chemical changes along plastic chains belonging to the C-H alkane group at wavenumber 2914.94, 2847.38, and 1471 cm-1. Enzyme produced by mold in this study were measured qualitatively. Perenniporia sp. produced laccase, manganese peroxidase, alkane hydroxylase, and lipase. Trametes polyzona also secreted similar enzyme, except lipase, while Porostereum spadiceum was negative for alkane hydroxylase. Aspergillus terreus isolates were positive for lipase and alkane hydroxylase, but Aspergillus fumigatus only produced lipase.

Conclusion: In this study, 8 mold with plastic biodegradation potential by producing various enzyme were identified.

Keywords: Biodegradation, Enzyme, Mangrove; Mold; Plastic; Responsible consumption & production    


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Kaseem M, Hamad K, Deri F. Thermoplastic starch blends: A review of recent works. Polymer Science Series A, (2012); 54(2): 165-176.

Obruča S. Controlled production and degradation of selected biomaterials. Brno: Vysoké učení technické v Brně, Fakulta chemická, (2010).

Klun U, Friedrich J, Kržan A. Polyamide-6 fibre degradation by a lignolytic fungus. Polymer degradation and stability, (2003); 79(1): 99-104.

Naima A, Safia A, Bashir A, Geoffery R. Isolation and identification of polystyrene biodegrading bacteria from soil. African Journal of Microbiology Research, (2010); 4(14): 1537-1541.

Ehara K, Iiyoshi Y, Tsutsumi Y, Nishida T. Polyethylene degradation by manganese peroxidase in the absence of hydrogen peroxide. Journal of wood science, (2000); 46(2): 180-183.

Premraj R, Doble M. Biodegradation of polymers. Indian Journal of Biotechnology, (2005); 4(2): 186-193.

Ameen F, Moslem M, Hadi S, Al-Sabri AE. Biodegradation of Low Density Polyethylene (LDPE) by Mangrove fungi from the red sea coast. Progress in Rubber Plastics and Recycling Technology, (2015); 31(2): 125-143.

Sowmya H, Ramalingappa B, Nayanashree G, Thippeswamy B, Krishnappa M. Polyethylene degradation by fungal consortium. International Journal of Environmental Research, (2015); 9(3): 823-830.

Fish NM, Harbron S, Allenby DJ, Lilly MD. Oxidation of n-alkanes: isolation of alkane hydroxylase from Pseudomonas putida. European journal of applied microbiology and biotechnology, (1983); 17(1): 57-63.

Van Beilen JB, Funhoff EG. Alkane hydroxylases involved in microbial alkane degradation. Applied microbiology and biotechnology, (2007); 74(1): 13-21.

Van Beilen JB, Li Z, Duetz WA, Smits TH, Witholt B. Diversity of alkane hydroxylase systems in the environment. Oil & gas science and technology, (2003); 58(4): 427-440.

Mishra S, Singh S. Microbial degradation of n-hexadecane in mineral salt medium as mediated by degradative enzymes. Bioresource Technology, (2012); 111148-154.

Skariyachan S, Megha M, Kini MN, Mukund KM, Rizvi A, et al. Selection and screening of microbial consortia for efficient and ecofriendly degradation of plastic garbage collected from urban and rural areas of Bangalore, India. Environmental monitoring and assessment, (2015); 187(1): 1-14.

Eberl A, Heumann S, Brückner T, Araujo R, Cavaco-Paulo A, et al. Enzymatic surface hydrolysis of poly (ethylene terephthalate) and bis (benzoyloxyethyl) terephthalate by lipase and cutinase in the presence of surface active molecules. Journal of biotechnology, (2009); 143(3): 207-212.

Bhardwaj H, Gupta R, Tiwari A. Communities of microbial enzymes associated with biodegradation of plastics. Journal of Polymers and the Environment, (2013); 21(2): 575-579.

Nathania TR, Kuswytasari ND. Studi Potensi Isolat Kapang Wonorejo Surabaya dalam Mendegradasi Polimer Bioplastik Poly Hydroxy Butyrate (PHB). Jurnal Sains dan Seni ITS, (2013); 2(2): E55-E58.

Larone DH, Larone DH Medically important fungi: a guide to identification. Chapter: Book Name. 1987 of publication; 196; Citeseer.

Watanabe T Pictorial atlas of soil and seed fungi: morphologies of cultured fungi and key to species. Chapter: Book Name. 2002 of publication; CRC press.

Liu H, Xu J, Liang R, Liu J. Characterization of the medium-and long-chain n-alkanes degrading Pseudomonas aeruginosa strain SJTD-1 and its alkane hydroxylase genes. PloS one, (2014); 9(8): e105506.

Gardes M, Bruns TD. ITS primers with enhanced specificity for basidiomycetes‐application to the identification of mycorrhizae and rusts. Molecular ecology, (1993); 2(2): 113-118.

Ilyas M. Isolasi dan Identifikasi Mikoflora Kapang pada Sampel Serasah Daun Tumbuhan di Kawasan Gunung Lawu, Surakarta, Jawa Tengah. Biodiversitas, (2007); 8(2): 105-110.

Alexopoulos CJ, Mims CW, Blackwell M Introductory mycology. Chapter: Book Name. 1996 of publication; John Wiley and Sons.

Gandjar I, Rifai MA Pengenalan kapang tropik umum. Chapter: Book Name. 1999 of publication; Yayasan Obor Indonesia.

Barnett HL Illustrated genera of imperfect fungi. Chapter: Book Name. 2013 of publication; Burgess Publishing Company.

Samson RA, Houbraken J Phylogenetic and taxonomic studies on the genera Penicillium and Talaromyces. Chapter: Book Name. 2011 of publication; CBS-KNAW Fungal Biodiversity Centre.

Webb JS, Nixon M, Eastwood IM, Greenhalgh M, Robson GD, et al. Fungal colonization and biodeterioration of plasticized polyvinyl chloride. Applied and environmental microbiology, (2000); 66(8): 3194-3200.

White T, Bruns T, Lee S, Taylor J (1990) Amplification and direct sequencing of fungal RNA genes for phylogenetics: 315-322 (in) MA INNIS, DH GELGARD, JJ SNINSKY & TJ WHITE (eds.) PCR Protocols: a Guide to Methods and Applications. San Diego, CA: Academic Press.

Tamura K, Stecher G, Peterson D, Filipski A, Kumar S. MEGA6: molecular evolutionary genetics analysis version 6.0. Molecular biology and evolution, (2013); 30(12): 2725-2729.

Thompson JD, Higgins DG, Gibson TJ. CLUSTAL W: improving the sensitivity of progressive multiple sequence alignment through sequence weighting, position-specific gap penalties and weight matrix choice. Nucleic acids research, (1994); 22(22): 4673-4680.

Saitou N, Nei M. The neighbor-joining method: a new method for reconstructing phylogenetic trees. Molecular biology and evolution, (1987); 4(4): 406-425.

Pramila R, Ramesh KV. Biodegradation of low density polyethylene (LDPE) by fungi isolated from marine water a SEM analysis. Afr J Microbiol Res, (2011); 5(28): 5013-5018.

Hosseini S, Salari M, Jamalizadeh E, Khezripoor S, Seifi M. Inhibition of mild steel corrosion in sulfuric acid by some newly synthesized organic compounds. Materials Chemistry and Physics, (2010); 119(1-2): 100-105.

Vantamuri A, Kaliwal B. Isolation, screening and identification of laccase producing fungi. Int j pharm bio sci, (2015); 6(3): 242-250.

Gupta P, Upadhyay L, Shrivastava R. Lipase Catalyzed-transesterification of Vegetable Oils by Lipolytic. Research Journal of Microbiology, (2011); 6(3): 281-288.

Kuswytasari N, Shovitri M, Andriyadi R. Soil Molds Diversity in The Coastal Wonorejo Surabaya; 2011.

Burdsall HH, Banik M, Cook ME. Serological Differentiation of Three Species of Armillaria and Lentinula Edodes by Enzyme-Linked Immunosorbent Assay Using Immunized Chickens as a Source of Antibodies. Mycologia, (1990); 82(4): 415-423.

Iwen PC, Hinrichs SH, Rupp ME. Utilization of the internal transcribed spacer regions as molecular targets to detect and identify human fungal pathogens. Medical mycology, (2002); 40(1): 87-109.

Schwarz P, Bretagne S, Gantier J-C, Garcia-Hermoso D, Lortholary O, et al. Molecular identification of zygomycetes from culture and experimentally infected tissues. Journal of Clinical Microbiology, (2006); 44(2): 340-349.

PÉRez-Sierra A, Henricot B. Identification of fungal species beyond morphology. Mycologist, (2002); 16(2): 42-46.

Gherbawy Y, Kesselboth C, Elhariry H, Hoffmann K (2010) Molecular barcoding of microscopic fungi with emphasis on the mucoralean genera Mucor and Rhizopus. Molecular identification of fungi: Springer. pp. 213-250.

Dharmayanti N. Filogenetika molekuler: metode taksonomi organisme berdasarkan sejarah evolusi. Wartazoa, (2011); 21(1): 1-10.

Esmaeili A, Pourbabaee AA, Alikhani HA, Shabani F, Esmaeili E. Biodegradation of low-density polyethylene (LDPE) by mixed culture of Lysinibacillus xylanilyticus and Aspergillus niger in soil. Plos one, (2013); 8(9): e71720.

Ojha N, Pradhan N, Singh S, Barla A, Shrivastava A, et al. Evaluation of HDPE and LDPE degradation by fungus, implemented by statistical optimization. Scientific Reports, (2017); 7(1): 1-13.

Wu Q, Li Y, Li Y, Gao S, Wang M, et al. Identification of a novel fungus, Leptosphaerulina chartarum SJTU59 and characterization of its xylanolytic enzymes. PLoS One, (2013); 8(9): e73729.

Hibbett DS, Ohman A, Glotzer D, Nuhn M, Kirk P, et al. Progress in molecular and morphological taxon discovery in Fungi and options for formal classification of environmental sequences. Fungal biology reviews, (2011); 25(1): 38-47.

Raaman N, Rajitha N, Jayshree A, Jegadeesh R. Biodegradation of plastic by Aspergillus spp. isolated from polythene polluted sites around Chennai. J Acad Indus Res, (2012); 1(6): 313-316.

Ibrahim IN, Maraqa A, Hameed KM, Saadoun IM, Maswadeh HM. Assessment of potential plastic-degrading fungi in Jordanian habitats. Turkish Journal of Biology, (2011); 35(5): 551-557.

Singh V, Dubey M, Bhadauria S. Biodeterioration of polyethylene high density by Aspergillus versicolor and Aspergillus terreus. Journal of Advanced Laboratory Research in Biology, (2012); 3(1): 47-49.

Arantes V, Milagres AM, Filley TR, Goodell B. Lignocellulosic polysaccharides and lignin degradation by wood decay fungi: the relevance of nonenzymatic Fenton-based reactions. Journal of Industrial Microbiology and Biotechnology, (2011); 38(4): 541-555.

Dashtban M, Schraft H, Syed TA, Qin W. Fungal biodegradation and enzymatic modification of lignin. International journal of biochemistry and molecular biology, (2010); 1(1): 36.

Vasina DV, Moiseenko KV, Fedorova TV, Tyazhelova TV. Lignin-degrading peroxidases in white-rot fungus Trametes hirsuta 072. Absolute expression quantification of full multigene family. PLoS One, (2017); 12(3): e0173813.

Knežević A, Milovanović I, Stajić M, Vukojević J. Potential of Trametes species to degrade lignin. International Biodeterioration & Biodegradation, (2013); 8552-56.

Bonhomme S, Cuer A, Delort A, Lemaire J, Sancelme M, et al. Environmental biodegradation of polyethylene. Polymer degradation and Stability, (2003); 81(3): 441-452.

Albertsson A-C, Karlsson S. The influence of biotic and abiotic environments on the degradation of polyethylene. Progress in Polymer science, (1990); 15(2): 177-192.

Tribedi P, Sil AK. Bioaugmentation of polyethylene succinate-contaminated soil with Pseudomonas sp. AKS2 results in increased microbial activity and better polymer degradation. Environmental Science and Pollution Research, (2013); 20(3): 1318-1326.

Jeon HJ, Kim MN. Functional analysis of alkane hydroxylase system derived from Pseudomonas aeruginosa E7 for low molecular weight polyethylene biodegradation. International Biodeterioration & Biodegradation, (2015); 103141-146.

Rojo F. Degradation of alkanes by bacteria. Environmental Microbiology, (2009); 11(10): 2477-2490.

Kale SK, Deshmukh AG, Dudhare MS, Patil VB. Microbial degradation of plastic: a review. Journal of Biochemical Technology, (2015); 6(2): 952-961.

Mayer AM, Staples RC. Laccase: new functions for an old enzyme. Phytochemistry, (2002); 60(6): 551-565.

Iiyoshi Y, Tsutsumi Y, Nishida T. Polyethylene degradation by lignin-degrading fungi and manganese peroxidase. Journal of wood science, (1998); 44(3): 222-229.




DOI: http://dx.doi.org/10.62940/als.v10i2.1681

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